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Polymorphic
offers various library construction services tailored to the specific
needs of our customers. Our high-throughput facility allows for
efficient handling of a large number of samples
cDNA Library Construction
Polymorphic offers the construction of plasmid-based cDNA libraries
from the following customer provided starting materials:
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Starting
Material
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Amount
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Tissue
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≥
1 gram
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Cells
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1
x 108
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Total
RNA
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≥
1 mg
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MRNA
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≥
5 µg
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High-quality
mRNA is synthesized into cDNA using oligo dT primers. Once both
strands are synthesized and annealed, the double stranded cDNA
is directionally cloned into an expression vector.
Shotgun Library Construction & Sequencing
Shotgun library construction and sequencing can begin with a variety
of samples such as cosmid, BAC, and YAC DNA. After a customer
consultation to determine the goals and needs of a specific project,
Polymorphic offers the following shotgun library service(s):
Construction:
- Plasmid
DNA purification and/or quality analysis of in-coming DNA
- Random
shearing to produce a population of DNA fragments within 1-3
KB
- Ligation
into a standard cloning vector
- Transformation
& glycerol stock production
- QA/QC
by DNA sequencing
Sequencing:
- Plating,
picking, and arranging colonies into high-throughput format
(96 or 384 wells)
- Plasmid
purification of clones
- Sequencing
assay design, primer synthesis, and bioinformatics analysis
- High-throughput
sequencing on ABI 3730xl DNA sequencers
- Contig
alignment and assembly
Upon conclusion of the project, the customer is provided with
a report including the original electropherograms, all primer
sequence information, and the full consensus sequence. All plasmid
DNA and primers are delivered.
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